Regional Tac Extraction#

Regional TAC extraction

Classes#

WriteRegionalTacs

Write regional TACs

Functions#

extract_roi_voxel_tacs_from_image_using_mask(...)

Function to extract ROI voxel tacs from an image using a mask image.

apply_mask_4d(→ numpy.ndarray)

Function to extract ROI voxel tacs from an array using a mask array.

voxel_average_w_uncertainty(→ tuple[numpy.ndarray, ...)

Spatially average flattened PET voxels and get the standard deviation as well.

write_tacs(input_image_path, label_map_path, ...[, ...])

Function to write Tissue Activity Curves for each region, given a segmentation,

roi_tac(...)

Function to write Tissue Activity Curves for a single region, given a mask,